Ploidy‐ and Purity‐Adjusted Allele‐Specific DNA Analysis Using CLONETv2
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چکیده
منابع مشابه
NUCL EAR DNA CONTENT AND DNA PLOIDY ANALYSIS IN BREAST CANCER
To investigate the patterns of DNA ploidy and proliferating activity in breast cancer and relate them to other prognostic factors, paraffin blocks of 53 cases of breast carcinoma were studied. Cancer cells obtained by mechanical tissue disaggregation were examined for DNA content, ploidy and S-phase fraction. DNA assay was done using a CAS interactive image analyzing system. All of the cas...
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This unit presents the most common methods of DNA content analysis. The techniques differ primarily in the mode of cell permeabilization (detergents versus prefixation with alcohol) and composition of the stain solution. Protocols are given for analysis of fixed cells, tissue samples, live cells (for subsequent sorting and culture), archival paraffin-embedded tissue, and apoptotic cells.
متن کاملnucl ear dna content and dna ploidy analysis in breast cancer
to investigate the patterns of dna ploidy and proliferating activity in breast cancer and relate them to other prognostic factors, paraffin blocks of 53 cases of breast carcinoma were studied. cancer cells obtained by mechanical tissue disaggregation were examined for dna content, ploidy and s-phase fraction. dna assay was done using a cas interactive image analyzing system. all of the cases sh...
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This is the first of a series of units discussing the application of cytometry to plant material. Techniques commonly used for mammalian nuclei evaluation need considerable modification to be successful with plant material. David Galbraith and his colleagues bring together many years of knowledge in plant cytometry. Their unit provides detailed protocols on measuring DNA content, ploidy, and ce...
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The nuclear DNA content of 50 ovarian tumors initially diagnosed as granulosa cell tumors was measured by flow cytometry using paraffin-embedded archival material. The follow-up period of the patients ranged from 4 months to 19 years. Thirty-eight tumors were diploid or near-diploid, while 5 were aneuploid. DNA profiles of 7 tumors could not be evaluated. All 50 tumors were immunohistochemicall...
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ژورنال
عنوان ژورنال: Current Protocols in Bioinformatics
سال: 2019
ISSN: 1934-3396,1934-340X
DOI: 10.1002/cpbi.81